CRISPRone

CRISPRone report for GCA_013913275.1_ASM1391327v1

♦ Seq 1: JACEQI010000053.1 Pseudomonas aeruginosa strain PAL1.14 NODE_53_length_1172_cov_26.0995, whole genome shotgun sequence

⇒Summary: seq-len = 1172 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 205-953 bp Zoom in on locus 1 x13 CRISPR array Location: 205-953 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 205-953 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 205-953 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACEQI010000022.1 Pseudomonas aeruginosa strain PAL1.14 NODE_22_length_85067_cov_24.4637, whole genome shotgun sequence

⇒Summary: seq-len = 85067 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16763-23551 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 16763-19984 bp Gene: pfam13280:WYL Type: other Location: 19997-20905 bp Gene: unk Type: unknown Location: 21185-22075 bp Gene: unk Type: unknown Location: 22210-22527 bp Gene: mkCas0115:csx3 Type: other Location: 22520-23551 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)