CRISPRone

CRISPRone report for GCA_013913465.1_ASM1391346v1

♦ Seq 1: JACEQR010000018.1 Pseudomonas aeruginosa strain PAL1.5 NODE_18_length_119480_cov_22.1487, whole genome shotgun sequence

⇒Summary: seq-len = 119480 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 76568-87153 bp Zoom in on locus 1 Gene: COG0640:csa3 Type: Subtype-I-A Location: 76568-77437 bp Gene: pfam00078:RT Type: other Location: 82346-83614 bp Gene: unk Type: unknown Location: 83764-84162 bp Gene: unk Type: unknown Location: 84346-84525 bp Gene: cls000170:cas4 Type: Type-I Location: 85609-87153 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACEQR010000001.1 Pseudomonas aeruginosa strain PAL1.5 NODE_1_length_887386_cov_20.5141, whole genome shotgun sequence

⇒Summary: seq-len = 887386 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 715448-725960 bp Zoom in on locus 1 x9 x13 CRISPR array Location: 715448-715966 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 715448-715966 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 716739-719420 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 719423-720991 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 720988-721518 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 721528-722670 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 722672-723334 bp Gene: pfam08798:cas6e Type: other Location: 723309-723920 bp Gene: cd09719:cas1 Type: universal Location: 723947-724837 bp Gene: pfam09707:cas2 Type: universal Location: 724834-725133 bp CRISPR array Location: 725198-725960 bp Num of repeats: 13 Spacers: s9-s20 CRISPR array Location: 725198-725960 bp Num of repeats: 13 Spacers: s9-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 715448-715966 bp]: array | spacers
           [Locus range 725198-725960 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)