CRISPRone

CRISPRone report for GCA_014040825.1_ASM1404082v1

♦ Seq 1: JACEUY010000001.1 Pseudomonas aeruginosa strain PAL1.67 NODE_1_length_895124_cov_20.6215, whole genome shotgun sequence

⇒Summary: seq-len = 895124 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 410583-411390 bp Zoom in on locus 1 x14 CRISPR array Location: 410583-411390 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 410583-411390 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 410583-411390 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACEUY010000019.1 Pseudomonas aeruginosa strain PAL1.67 NODE_19_length_85067_cov_21.4951, whole genome shotgun sequence

⇒Summary: seq-len = 85067 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 16763-23551 bp Zoom in on locus 1 Gene: cd09696:cas3 Type: Subtype-I-U Location: 16763-19984 bp Gene: pfam13280:WYL Type: other Location: 19997-20905 bp Gene: unk Type: unknown Location: 21185-22075 bp Gene: unk Type: unknown Location: 22210-22527 bp Gene: mkCas0115:csx3 Type: other Location: 22520-23551 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)