CRISPRone

CRISPRone report for GCA_014042415.1_ASM1404241v1

♦ Seq 1: JACFSX010000005.1 Bacteroides fragilis strain BFR_KZ11 NODE_5_length_407555_cov_29.120264, whole genome shotgun sequence

⇒Summary: seq-len = 407555 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 398512-406391 bp Zoom in on locus 1 x14 antiRepeat Location: 398512-398557 bp Strand: + Match length: 26 bp Mismatch: 21 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 398625-402935 bp Gene: unk Type: unknown Location: 402951-403475 bp Gene: unk Type: unknown Location: 403542-403832 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 403969-404901 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 404905-405237 bp CRISPR array Location: 405347-406391 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 405347-406391 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 405347-406391 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACFSX010000002.1 Bacteroides fragilis strain BFR_KZ11 NODE_2_length_674508_cov_25.424454, whole genome shotgun sequence

⇒Summary: seq-len = 674508 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 492583-496196 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 492583-493482 bp Gene: unk Type: unknown Location: 493479-494744 bp Gene: unk Type: unknown Location: 494752-495525 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 495528-496196 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JACFSX010000009.1 Bacteroides fragilis strain BFR_KZ11 NODE_9_length_234186_cov_29.748533, whole genome shotgun sequence

⇒Summary: seq-len = 234186 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 22525-30480 bp Zoom in on locus 1 x2 CRISPR array Location: 22525-22619 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 22525-22619 bp Num of repeats: 2 Spacers: s1-s1 Gene: cd09725:cas2 Type: universal Location: 22832-23095 bp Gene: cd09722:cas1 Type: universal Location: 23098-24111 bp Gene: pfam01930:cas4 Type: Type-I Location: 24108-24665 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 24685-25743 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 25756-27081 bp Gene: COG1203:cas3 Type: Type-I Location: 27085-29244 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 29234-29797 bp Gene: cd09652:cas6 Type: other Location: 29809-30480 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 22525-22619 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)