CRISPRone

CRISPRone report for GCA_014042445.1_ASM1404244v1

♦ Seq 1: JACFSU010000007.1 Bacteroides fragilis strain BFR_KZ08 NODE_7_length_262878_cov_19.927764, whole genome shotgun sequence

⇒Summary: seq-len = 262878 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 205847-209524 bp Zoom in on locus 1 Gene: cd09652:cas6 Type: other Location: 205847-206518 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 206530-207093 bp Gene: COG1203:cas3 Type: Type-I Location: 207083-209242 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 209246-209524 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACFSU010000015.1 Bacteroides fragilis strain BFR_KZ08 NODE_15_length_95676_cov_20.891427, whole genome shotgun sequence

⇒Summary: seq-len = 95676 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4003-7616 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 4003-4902 bp Gene: unk Type: unknown Location: 4899-6164 bp Gene: unk Type: unknown Location: 6172-6945 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 6948-7616 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JACFSU010000014.1 Bacteroides fragilis strain BFR_KZ08 NODE_14_length_121682_cov_37.792356, whole genome shotgun sequence

⇒Summary: seq-len = 121682 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 112471-120161 bp Zoom in on locus 1 x13 Gene: cd09643:cas9 Type: Subtype-II-C Location: 112471-116781 bp Gene: unk Type: unknown Location: 116797-117321 bp Gene: unk Type: unknown Location: 117388-117696 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 117816-118748 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 118752-119084 bp CRISPR array Location: 119193-120161 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 119193-120161 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 119193-120161 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JACFSU010000010.1 Bacteroides fragilis strain BFR_KZ08 NODE_10_length_254175_cov_20.135392, whole genome shotgun sequence

⇒Summary: seq-len = 254175 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 237798-245676 bp Zoom in on locus 1 x19 CRISPR array Location: 237798-238986 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 237798-238986 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09725:cas2 Type: universal Location: 239199-239462 bp Gene: cd09722:cas1 Type: universal Location: 239465-240478 bp Gene: pfam01930:cas4 Type: Type-I Location: 240475-240987 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 241052-242110 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 242123-243232 bp Gene: unk Type: unknown Location: 243270-244043 bp Gene: cd09655:casR Type: Type-I Location: 244030-245676 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 237798-238986 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)