CRISPRone

CRISPRone report for GCA_014042455.1_ASM1404245v1

♦ Seq 1: JACFSV010000008.1 Bacteroides fragilis strain BFR_KZ09 NODE_8_length_239558_cov_19.436155, whole genome shotgun sequence

⇒Summary: seq-len = 239558 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 95600-110942 bp Zoom in on locus 1 x24 Gene: cls000004:cas6 Type: other Location: 95600-96331 bp Gene: unk Type: unknown Location: 96349-96975 bp Gene: unk Type: unknown Location: 96951-97730 bp Gene: cash17:cash17 Type: Type- Location: 97775-99202 bp Gene: unk Type: unknown Location: 99199-99678 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 99692-101101 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 101106-102908 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 102901-104040 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 104060-104899 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 104912-105322 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 105319-106269 bp Gene: cd09634:cas1 Type: universal Location: 106289-108559 bp Gene: cd09725:cas2 Type: universal Location: 108553-108843 bp CRISPR array Location: 109291-110942 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 109291-110942 bp Num of repeats: 24 Spacers: s1-s23 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 109291-110942 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACFSV010000004.1 Bacteroides fragilis strain BFR_KZ09 NODE_4_length_332869_cov_21.435614, whole genome shotgun sequence

⇒Summary: seq-len = 332869 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 100711-104324 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 100711-101379 bp Gene: unk Type: unknown Location: 101382-102155 bp Gene: unk Type: unknown Location: 102163-103428 bp Gene: pfam13280:WYL Type: other Location: 103425-104324 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)