CRISPRone

CRISPRone report for GCA_014042465.1_ASM1404246v1

♦ Seq 1: JACFSW010000006.1 Bacteroides fragilis strain BFR_KZ10 NODE_6_length_397964_cov_23.745273, whole genome shotgun sequence

⇒Summary: seq-len = 397964 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1550-9623 bp Zoom in on locus 1 x18 CRISPR array Location: 1550-2901 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 1550-2901 bp Num of repeats: 18 Spacers: s1-s17 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 3010-3342 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 3346-4278 bp Gene: unk Type: unknown Location: 4398-4706 bp Gene: unk Type: unknown Location: 4773-5297 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 5313-9623 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1550-2901 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACFSW010000001.1 Bacteroides fragilis strain BFR_KZ10 NODE_1_length_624044_cov_21.929758, whole genome shotgun sequence

⇒Summary: seq-len = 624044 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 220445-230163 bp Zoom in on locus 1 Gene: mkCas0123:csx19 Type: Subtype-III-D Location: 220445-221695 bp Gene: unk Type: unknown Location: 221730-221891 bp Gene: unk Type: unknown Location: 222032-222208 bp Gene: pfam13280:WYL Type: other Location: 222974-223984 bp Gene: cd09710:cas3 Type: Subtype-I-D Location: 224023-230163 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JACFSW010000004.1 Bacteroides fragilis strain BFR_KZ10 NODE_4_length_410613_cov_24.077235, whole genome shotgun sequence

⇒Summary: seq-len = 410613 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 272630-276243 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 272630-273529 bp Gene: unk Type: unknown Location: 273526-274791 bp Gene: unk Type: unknown Location: 274799-275572 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 275575-276243 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)