CRISPRone

CRISPRone report for GCA_014467035.1_ASM1446703v1

♦ Seq 1: CP060703.1 Pseudomonas aeruginosa strain NRD619 chromosome, complete genome

⇒Summary: seq-len = 6438945 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1505629-1506737 bp 2 Locus 2: 2809102-2819664 bp Zoom in on locus 1 x19 Zoom in on locus 2 x26 x7 CRISPR array Location: 1505629-1506737 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1505629-1506737 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 2809102-2810630 bp Num of repeats: 26 Spacers: s19-s43 CRISPR array Location: 2809102-2810630 bp Num of repeats: 26 Spacers: s19-s43 Gene: cd09739:cas6f Type: other Location: 2810880-2811443 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2811447-2812475 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2812486-2813469 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2813456-2814760 bp Gene: COG1203:cas3 Type: Type-I Location: 2814818-2818048 bp Gene: cd09718:cas1 Type: universal Location: 2818045-2819019 bp CRISPR array Location: 2819277-2819664 bp Num of repeats: 7 Spacers: s44-s49 CRISPR array Location: 2819277-2819664 bp Num of repeats: 7 Spacers: s44-s49 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1505629-1506737 bp]: array | spacers
           [Locus range 2809102-2810630 bp]: array | spacers
           [Locus range 2819277-2819664 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)