CRISPRone

CRISPRone report for GCA_015265655.1_ASM1526565v1

♦ Seq 1: JADIWI010000030.1 Pseudomonas aeruginosa strain P1 contig00030, whole genome shotgun sequence

⇒Summary: seq-len = 75490 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 27113-37964 bp Zoom in on locus 1 x11 x28 CRISPR array Location: 27113-27741 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 27113-27741 bp Num of repeats: 11 Spacers: s1-s10 Gene: cd09718:cas1 Type: universal Location: 27992-28966 bp Gene: COG1203:cas3 Type: Type-I Location: 28963-32193 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 32251-33555 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 33542-34525 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 34536-35564 bp Gene: cd09739:cas6f Type: other Location: 35568-36131 bp CRISPR array Location: 36316-37964 bp Num of repeats: 28 Spacers: s11-s37 CRISPR array Location: 36316-37964 bp Num of repeats: 28 Spacers: s11-s37 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 27113-27741 bp]: array | spacers
           [Locus range 36316-37964 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)