CRISPRone

CRISPRone report for GCA_015317305.1_ASM1531730v1

♦ Seq 1: JABDTZ010000039.1 Pseudomonas aeruginosa strain 8-12 ONMEMMID_39, whole genome shotgun sequence

⇒Summary: seq-len = 15792 bp; # of CRISPR array = 2; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3027-13652 bp Zoom in on locus 1 x13 x21 CRISPR array Location: 3027-3775 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 3027-3775 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09739:cas6f Type: other Location: 4024-4587 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 4591-5619 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5630-6613 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 6600-7145 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7221-7904 bp Gene: COG1203:cas3 Type: Type-I Location: 7962-11192 bp Gene: cd09718:cas1 Type: universal Location: 11189-12163 bp CRISPR array Location: 12424-13652 bp Num of repeats: 21 Spacers: s13-s32 CRISPR array Location: 12424-13652 bp Num of repeats: 21 Spacers: s13-s32 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 3027-3775 bp]: array | spacers
           [Locus range 12424-13652 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)