CRISPRone

CRISPRone report for GCA_015317345.1_ASM1531734v1

♦ Seq 1: JABDUD010000037.1 Pseudomonas aeruginosa strain 6-38 DAFGIIAP_37, whole genome shotgun sequence

⇒Summary: seq-len = 56245 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 32388-45095 bp Zoom in on locus 1 Gene: mkCas0115:csx3 Type: other Location: 32388-33302 bp Gene: unk Type: unknown Location: 33766-34266 bp Gene: unk Type: unknown Location: 34266-35168 bp Gene: mkCas0090:PD-DExK Type: other Location: 35207-35932 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 44319-45095 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABDUD010000027.1 Pseudomonas aeruginosa strain 6-38 DAFGIIAP_27, whole genome shotgun sequence

⇒Summary: seq-len = 68603 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24129-34573 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 24129-24817 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 24129-24817 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 25066-25629 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 25633-26661 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 26672-27655 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27642-28946 bp Gene: COG1203:cas3 Type: Type-I Location: 29004-32234 bp Gene: cd09718:cas1 Type: universal Location: 32231-33205 bp CRISPR array Location: 33466-34573 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 33466-34573 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 24129-24817 bp]: array | spacers
           [Locus range 33466-34573 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)