CRISPRone

CRISPRone report for GCA_015317395.1_ASM1531739v1

♦ Seq 1: JABDUE010000024.1 Pseudomonas aeruginosa strain 6-25 IPJAFALI_24, whole genome shotgun sequence

⇒Summary: seq-len = 25846 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 12576-23735 bp Zoom in on locus 1 x32 x12 CRISPR array Location: 12576-14464 bp Num of repeats: 32 Spacers: s1-s31 CRISPR array Location: 12576-14464 bp Num of repeats: 32 Spacers: s1-s31 Gene: cd09718:cas1 Type: universal Location: 14725-15699 bp Gene: COG1203:cas3 Type: Type-I Location: 15696-18926 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 18984-20288 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 20275-21258 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 21269-22297 bp Gene: cd09739:cas6f Type: other Location: 22301-22864 bp CRISPR array Location: 23048-23735 bp Num of repeats: 12 Spacers: s32-s42 CRISPR array Location: 23048-23735 bp Num of repeats: 12 Spacers: s32-s42 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 12576-14464 bp]: array | spacers
           [Locus range 23048-23735 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)