CRISPRone

CRISPRone report for GCA_015317675.1_ASM1531767v1

♦ Seq 1: JABDUR010000048.1 Pseudomonas aeruginosa strain 4-125 MEDMOODE_48, whole genome shotgun sequence

⇒Summary: seq-len = 18713 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 6098-16542 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 6098-7206 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 6098-7206 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 7466-8440 bp Gene: COG1203:cas3 Type: Type-I Location: 8437-11667 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 11725-13029 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 13016-13999 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 14010-15038 bp Gene: cd09739:cas6f Type: other Location: 15042-15605 bp CRISPR array Location: 15855-16542 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 15855-16542 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 6098-7206 bp]: array | spacers
           [Locus range 15855-16542 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)