CRISPRone

CRISPRone report for GCA_015317825.1_ASM1531782v1

♦ Seq 1: JABDUY010000220.1 Pseudomonas aeruginosa strain 3-41 DMKIDGML_220, whole genome shotgun sequence

⇒Summary: seq-len = 8510 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 7634-8382 bp Zoom in on locus 1 x13 CRISPR array Location: 7634-8382 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 7634-8382 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 7634-8382 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABDUY010000001.1 Pseudomonas aeruginosa strain 3-41 DMKIDGML_1, whole genome shotgun sequence

⇒Summary: seq-len = 130518 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 35952-41424 bp Zoom in on locus 1 Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 35952-36602 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 36609-37652 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 37652-38407 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 38436-39161 bp Gene: cd09708:DinG Type: Subtype-IV-A Location: 39250-41424 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)