CRISPRone

CRISPRone report for GCA_015318195.1_ASM1531819v1

♦ Seq 1: JABDVS010000001.1 Pseudomonas aeruginosa strain C58 N_1_length_130295, whole genome shotgun sequence

⇒Summary: seq-len = 130295 bp; # of CRISPR array = 0; # of cas gene = 5  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 123435-128907 bp Zoom in on locus 1 Gene: cd09707:csf3gr5 Type: Subtype-IV-A Location: 123435-124085 bp Gene: cd09706:csf2gr7 Type: Subtype-IV-A Location: 124092-125135 bp Gene: cd09705:csf1gr8 Type: Subtype-IV-A Location: 125135-125890 bp Gene: mkCas0159:csf5gr6 Type: Subtype-IV-A Location: 125919-126644 bp Gene: cd09708:DinG Type: Subtype-IV-A Location: 126733-128907 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JABDVS010000830.1 Pseudomonas aeruginosa strain C58 N_830_length_2093, whole genome shotgun sequence

⇒Summary: seq-len = 2093 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 155-963 bp Zoom in on locus 1 x14 CRISPR array Location: 155-963 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 155-963 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 155-963 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JABDVS010002652.1 Pseudomonas aeruginosa strain C58 N_2652_length_280, whole genome shotgun sequence

⇒Summary: seq-len = 280 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 83-277 bp Zoom in on locus 1 Gene: pfam09827:cas2 Type: universal Location: 83-277 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)