CRISPRone

CRISPRone report for GCA_015351815.1_ASM1535181v1

♦ Seq 1: JADKQP010000076.1 Clostridioides difficile strain CDI-16 20170141_76_length_2288, whole genome shotgun sequence

⇒Summary: seq-len = 2288 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 197-690 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQP010000026.1 Clostridioides difficile strain CDI-16 20170141_26_length_66217, whole genome shotgun sequence

⇒Summary: seq-len = 66217 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQP010000022.1 Clostridioides difficile strain CDI-16 20170141_22_length_77388, whole genome shotgun sequence

⇒Summary: seq-len = 77388 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15648-16535 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQP010000002.1 Clostridioides difficile strain CDI-16 20170141_2_length_157598, whole genome shotgun sequence

⇒Summary: seq-len = 157598 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 84593-86332 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQP010000015.1 Clostridioides difficile strain CDI-16 20170141_15_length_107497, whole genome shotgun sequence

⇒Summary: seq-len = 107497 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29792-30219 bp]: array | spacers
           [Locus range 30822-31246 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQP010000065.1 Clostridioides difficile strain CDI-16 20170141_65_length_8428, whole genome shotgun sequence

⇒Summary: seq-len = 8428 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4723-5478 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQP010000031.1 Clostridioides difficile strain CDI-16 20170141_31_length_53980, whole genome shotgun sequence

⇒Summary: seq-len = 53980 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5260-5421 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQP010000008.1 Clostridioides difficile strain CDI-16 20170141_8_length_121466, whole genome shotgun sequence

⇒Summary: seq-len = 121466 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 74771-75727 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQP010000007.1 Clostridioides difficile strain CDI-16 20170141_7_length_132150, whole genome shotgun sequence

⇒Summary: seq-len = 132150 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5780-6993 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)