CRISPRone

CRISPRone report for GCA_015351825.1_ASM1535182v1

♦ Seq 1: JADKQM010000095.1 Clostridioides difficile strain CDI-19 20170364_95_length_11654, whole genome shotgun sequence

⇒Summary: seq-len = 11654 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1670-2685 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQM010000004.1 Clostridioides difficile strain CDI-19 20170364_4_length_89538, whole genome shotgun sequence

⇒Summary: seq-len = 89538 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6109-6403 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQM010000013.1 Clostridioides difficile strain CDI-19 20170364_13_length_62590, whole genome shotgun sequence

⇒Summary: seq-len = 62590 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 43301-43859 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQM010000033.1 Clostridioides difficile strain CDI-19 20170364_33_length_41871, whole genome shotgun sequence

⇒Summary: seq-len = 41871 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31419-32569 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQM010000036.1 Clostridioides difficile strain CDI-19 20170364_36_length_38214, whole genome shotgun sequence

⇒Summary: seq-len = 38214 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQM010000023.1 Clostridioides difficile strain CDI-19 20170364_23_length_53833, whole genome shotgun sequence

⇒Summary: seq-len = 53833 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 25477-26037 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQM010000012.1 Clostridioides difficile strain CDI-19 20170364_12_length_64606, whole genome shotgun sequence

⇒Summary: seq-len = 64606 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 23021-24691 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQM010000084.1 Clostridioides difficile strain CDI-19 20170364_84_length_14422, whole genome shotgun sequence

⇒Summary: seq-len = 14422 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8874-9232 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQM010000017.1 Clostridioides difficile strain CDI-19 20170364_17_length_60752, whole genome shotgun sequence

⇒Summary: seq-len = 60752 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5288-5447 bp]: array | spacers
           [Locus range 56360-57307 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)