CRISPRone

CRISPRone report for GCA_015351875.1_ASM1535187v1

♦ Seq 1: JADKQQ010000042.1 Clostridioides difficile strain CDI-15 20170129_42_length_26326, whole genome shotgun sequence

⇒Summary: seq-len = 26326 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 141-897 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQQ010000003.1 Clostridioides difficile strain CDI-15 20170129_3_length_210676, whole genome shotgun sequence

⇒Summary: seq-len = 210676 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 84694-85122 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQQ010000017.1 Clostridioides difficile strain CDI-15 20170129_17_length_85149, whole genome shotgun sequence

⇒Summary: seq-len = 85149 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 84139-85158 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQQ010000014.1 Clostridioides difficile strain CDI-15 20170129_14_length_114381, whole genome shotgun sequence

⇒Summary: seq-len = 114381 bp; # of CRISPR array = 0; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQQ010000013.1 Clostridioides difficile strain CDI-15 20170129_13_length_118162, whole genome shotgun sequence

⇒Summary: seq-len = 118162 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7696-7857 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQQ010000008.1 Clostridioides difficile strain CDI-15 20170129_8_length_150645, whole genome shotgun sequence

⇒Summary: seq-len = 150645 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 119657-120806 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQQ010000015.1 Clostridioides difficile strain CDI-15 20170129_15_length_92320, whole genome shotgun sequence

⇒Summary: seq-len = 92320 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 87331-87947 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQQ010000021.1 Clostridioides difficile strain CDI-15 20170129_21_length_68203, whole genome shotgun sequence

⇒Summary: seq-len = 68203 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3499-4517 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQQ010000007.1 Clostridioides difficile strain CDI-15 20170129_7_length_162344, whole genome shotgun sequence

⇒Summary: seq-len = 162344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44741-44835 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQQ010000001.1 Clostridioides difficile strain CDI-15 20170129_1_length_286002, whole genome shotgun sequence

⇒Summary: seq-len = 286002 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 241286-241643 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)