CRISPRone

CRISPRone report for GCA_015351915.1_ASM1535191v1

♦ Seq 1: JADKQD010000059.1 Clostridioides difficile strain CDI-28 20170785_59_length_19150, whole genome shotgun sequence

⇒Summary: seq-len = 19150 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18381-18803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQD010000002.1 Clostridioides difficile strain CDI-28 20170785_2_length_184232, whole genome shotgun sequence

⇒Summary: seq-len = 184232 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 178177-178271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQD010000001.1 Clostridioides difficile strain CDI-28 20170785_1_length_237746, whole genome shotgun sequence

⇒Summary: seq-len = 237746 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQD010000011.1 Clostridioides difficile strain CDI-28 20170785_11_length_98329, whole genome shotgun sequence

⇒Summary: seq-len = 98329 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 72853-73078 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQD010000007.1 Clostridioides difficile strain CDI-28 20170785_7_length_114744, whole genome shotgun sequence

⇒Summary: seq-len = 114744 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2686-3708 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQD010000009.1 Clostridioides difficile strain CDI-28 20170785_9_length_104464, whole genome shotgun sequence

⇒Summary: seq-len = 104464 bp; # of CRISPR array = 6; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15397-16149 bp]: array | spacers
           [Locus range 50716-51073 bp]: array | spacers
           [Locus range 53906-54132 bp]: array | spacers
           [Locus range 54366-54527 bp]: array | spacers
           [Locus range 56326-56814 bp]: array | spacers
           [Locus range 99024-99186 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQD010000008.1 Clostridioides difficile strain CDI-28 20170785_8_length_113277, whole genome shotgun sequence

⇒Summary: seq-len = 113277 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 84481-86358 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQD010000003.1 Clostridioides difficile strain CDI-28 20170785_3_length_176772, whole genome shotgun sequence

⇒Summary: seq-len = 176772 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 175046-175539 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQD010000042.1 Clostridioides difficile strain CDI-28 20170785_42_length_32504, whole genome shotgun sequence

⇒Summary: seq-len = 32504 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23553-24245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)