CRISPRone

CRISPRone report for GCA_015351925.1_ASM1535192v1

♦ Seq 1: JADKQC010000006.1 Clostridioides difficile strain CDI-29 20170845_6_length_122106, whole genome shotgun sequence

⇒Summary: seq-len = 122106 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQC010000088.1 Clostridioides difficile strain CDI-29 20170845_88_length_3398, whole genome shotgun sequence

⇒Summary: seq-len = 3398 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3096-3390 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQC010000003.1 Clostridioides difficile strain CDI-29 20170845_3_length_141895, whole genome shotgun sequence

⇒Summary: seq-len = 141895 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113805-115422 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQC010000022.1 Clostridioides difficile strain CDI-29 20170845_22_length_72844, whole genome shotgun sequence

⇒Summary: seq-len = 72844 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQC010000034.1 Clostridioides difficile strain CDI-29 20170845_34_length_44282, whole genome shotgun sequence

⇒Summary: seq-len = 44282 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 38980-39075 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQC010000086.1 Clostridioides difficile strain CDI-29 20170845_86_length_4173, whole genome shotgun sequence

⇒Summary: seq-len = 4173 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQC010000021.1 Clostridioides difficile strain CDI-29 20170845_21_length_73090, whole genome shotgun sequence

⇒Summary: seq-len = 73090 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23428-23717 bp]: array | spacers
           [Locus range 25582-25938 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQC010000046.1 Clostridioides difficile strain CDI-29 20170845_46_length_29573, whole genome shotgun sequence

⇒Summary: seq-len = 29573 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 20928-21551 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQC010000041.1 Clostridioides difficile strain CDI-29 20170845_41_length_36973, whole genome shotgun sequence

⇒Summary: seq-len = 36973 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33798-34424 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQC010000059.1 Clostridioides difficile strain CDI-29 20170845_59_length_17963, whole genome shotgun sequence

⇒Summary: seq-len = 17963 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13777-14600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQC010000077.1 Clostridioides difficile strain CDI-29 20170845_77_length_6935, whole genome shotgun sequence

⇒Summary: seq-len = 6935 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5648-6334 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)