CRISPRone

CRISPRone report for GCA_015351935.1_ASM1535193v1

♦ Seq 1: JADKRD010000172.1 Clostridioides difficile strain CDI-02 20161080_172_length_6679, whole genome shotgun sequence

⇒Summary: seq-len = 6679 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1552-1969 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKRD010000054.1 Clostridioides difficile strain CDI-02 20161080_54_length_24457, whole genome shotgun sequence

⇒Summary: seq-len = 24457 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12076-12434 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKRD010000035.1 Clostridioides difficile strain CDI-02 20161080_35_length_31356, whole genome shotgun sequence

⇒Summary: seq-len = 31356 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16538-16632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKRD010000086.1 Clostridioides difficile strain CDI-02 20161080_86_length_15062, whole genome shotgun sequence

⇒Summary: seq-len = 15062 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6477-7231 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKRD010000095.1 Clostridioides difficile strain CDI-02 20161080_95_length_13462, whole genome shotgun sequence

⇒Summary: seq-len = 13462 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9848-10008 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKRD010000013.1 Clostridioides difficile strain CDI-02 20161080_13_length_52727, whole genome shotgun sequence

⇒Summary: seq-len = 52727 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33509-34132 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKRD010000001.1 Clostridioides difficile strain CDI-02 20161080_1_length_103117, whole genome shotgun sequence

⇒Summary: seq-len = 103117 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 12208-12895 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKRD010000017.1 Clostridioides difficile strain CDI-02 20161080_17_length_47185, whole genome shotgun sequence

⇒Summary: seq-len = 47185 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20790-21873 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKRD010000042.1 Clostridioides difficile strain CDI-02 20161080_42_length_29906, whole genome shotgun sequence

⇒Summary: seq-len = 29906 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19332-19755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKRD010000105.1 Clostridioides difficile strain CDI-02 20161080_105_length_11955, whole genome shotgun sequence

⇒Summary: seq-len = 11955 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKRD010000082.1 Clostridioides difficile strain CDI-02 20161080_82_length_15581, whole genome shotgun sequence

⇒Summary: seq-len = 15581 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12630-14034 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)