CRISPRone

CRISPRone report for GCA_015351985.1_ASM1535198v1

♦ Seq 1: JADKQE010000059.1 Clostridioides difficile strain CDI-27 20170716_59_length_18336, whole genome shotgun sequence

⇒Summary: seq-len = 18336 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2534-3745 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQE010000056.1 Clostridioides difficile strain CDI-27 20170716_56_length_19248, whole genome shotgun sequence

⇒Summary: seq-len = 19248 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17813-18903 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQE010000004.1 Clostridioides difficile strain CDI-27 20170716_4_length_148400, whole genome shotgun sequence

⇒Summary: seq-len = 148400 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 60986-62722 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQE010000028.1 Clostridioides difficile strain CDI-27 20170716_28_length_53692, whole genome shotgun sequence

⇒Summary: seq-len = 53692 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48180-48340 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQE010000003.1 Clostridioides difficile strain CDI-27 20170716_3_length_148819, whole genome shotgun sequence

⇒Summary: seq-len = 148819 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 143604-144618 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQE010000089.1 Clostridioides difficile strain CDI-27 20170716_89_length_6807, whole genome shotgun sequence

⇒Summary: seq-len = 6807 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6284-6774 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQE010000006.1 Clostridioides difficile strain CDI-27 20170716_6_length_110860, whole genome shotgun sequence

⇒Summary: seq-len = 110860 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 102062-102620 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQE010000015.1 Clostridioides difficile strain CDI-27 20170716_15_length_71013, whole genome shotgun sequence

⇒Summary: seq-len = 71013 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQE010000002.1 Clostridioides difficile strain CDI-27 20170716_2_length_150095, whole genome shotgun sequence

⇒Summary: seq-len = 150095 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97144-97502 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQE010000121.1 Clostridioides difficile strain CDI-27 20170716_121_length_2047, whole genome shotgun sequence

⇒Summary: seq-len = 2047 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1229-2049 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQE010000084.1 Clostridioides difficile strain CDI-27 20170716_84_length_8199, whole genome shotgun sequence

⇒Summary: seq-len = 8199 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4407-4702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)