CRISPRone

CRISPRone report for GCA_015352015.1_ASM1535201v1

♦ Seq 1: JADKQH010000010.1 Clostridioides difficile strain CDI-24 20170654_10_length_131538, whole genome shotgun sequence

⇒Summary: seq-len = 131538 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18227-18718 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQH010000034.1 Clostridioides difficile strain CDI-24 20170654_34_length_39846, whole genome shotgun sequence

⇒Summary: seq-len = 39846 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24108-24465 bp]: array | spacers
           [Locus range 26116-26342 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQH010000068.1 Clostridioides difficile strain CDI-24 20170654_68_length_508, whole genome shotgun sequence

⇒Summary: seq-len = 508 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34-522 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQH010000011.1 Clostridioides difficile strain CDI-24 20170654_11_length_131212, whole genome shotgun sequence

⇒Summary: seq-len = 131212 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124778-125271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQH010000012.1 Clostridioides difficile strain CDI-24 20170654_12_length_119271, whole genome shotgun sequence

⇒Summary: seq-len = 119271 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44344-44702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQH010000002.1 Clostridioides difficile strain CDI-24 20170654_2_length_226191, whole genome shotgun sequence

⇒Summary: seq-len = 226191 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 86093-87241 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQH010000050.1 Clostridioides difficile strain CDI-24 20170654_50_length_5092, whole genome shotgun sequence

⇒Summary: seq-len = 5092 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3601-4751 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQH010000036.1 Clostridioides difficile strain CDI-24 20170654_36_length_38437, whole genome shotgun sequence

⇒Summary: seq-len = 38437 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 26103-26460 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQH010000006.1 Clostridioides difficile strain CDI-24 20170654_6_length_166576, whole genome shotgun sequence

⇒Summary: seq-len = 166576 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQH010000019.1 Clostridioides difficile strain CDI-24 20170654_19_length_91618, whole genome shotgun sequence

⇒Summary: seq-len = 91618 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 87331-87947 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQH010000001.1 Clostridioides difficile strain CDI-24 20170654_1_length_318572, whole genome shotgun sequence

⇒Summary: seq-len = 318572 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64609-66078 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JADKQH010000004.1 Clostridioides difficile strain CDI-24 20170654_4_length_187463, whole genome shotgun sequence

⇒Summary: seq-len = 187463 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20108-20202 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: JADKQH010000038.1 Clostridioides difficile strain CDI-24 20170654_38_length_34514, whole genome shotgun sequence

⇒Summary: seq-len = 34514 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5178-5338 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)