CRISPRone

CRISPRone report for GCA_015352035.1_ASM1535203v1

♦ Seq 1: JADKQK010000003.1 Clostridioides difficile strain CDI-21 20170479_3_length_319682, whole genome shotgun sequence

⇒Summary: seq-len = 319682 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 217086-217643 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQK010000008.1 Clostridioides difficile strain CDI-21 20170479_8_length_151217, whole genome shotgun sequence

⇒Summary: seq-len = 151217 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77505-79175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQK010000025.1 Clostridioides difficile strain CDI-21 20170479_25_length_53697, whole genome shotgun sequence

⇒Summary: seq-len = 53697 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5284-5443 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQK010000009.1 Clostridioides difficile strain CDI-21 20170479_9_length_147120, whole genome shotgun sequence

⇒Summary: seq-len = 147120 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 143183-144197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQK010000004.1 Clostridioides difficile strain CDI-21 20170479_4_length_209033, whole genome shotgun sequence

⇒Summary: seq-len = 209033 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 205442-206390 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQK010000002.1 Clostridioides difficile strain CDI-21 20170479_2_length_400531, whole genome shotgun sequence

⇒Summary: seq-len = 400531 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5941-6235 bp]: array | spacers
           [Locus range 214350-214708 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQK010000015.1 Clostridioides difficile strain CDI-21 20170479_15_length_92360, whole genome shotgun sequence

⇒Summary: seq-len = 92360 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53088-54106 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQK010000026.1 Clostridioides difficile strain CDI-21 20170479_26_length_51114, whole genome shotgun sequence

⇒Summary: seq-len = 51114 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3053-3613 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)