CRISPRone

CRISPRone report for GCA_015352055.1_ASM1535205v1

♦ Seq 1: JADKQL010000057.1 Clostridioides difficile strain CDI-20 20170383_57_length_21622, whole genome shotgun sequence

⇒Summary: seq-len = 21622 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 20018-21364 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQL010000050.1 Clostridioides difficile strain CDI-20 20170383_50_length_27905, whole genome shotgun sequence

⇒Summary: seq-len = 27905 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7158-7317 bp]: array | spacers
           [Locus range 9118-9342 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQL010000039.1 Clostridioides difficile strain CDI-20 20170383_39_length_43711, whole genome shotgun sequence

⇒Summary: seq-len = 43711 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34435-34860 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQL010000033.1 Clostridioides difficile strain CDI-20 20170383_33_length_47221, whole genome shotgun sequence

⇒Summary: seq-len = 47221 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 567-2305 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQL010000054.1 Clostridioides difficile strain CDI-20 20170383_54_length_23064, whole genome shotgun sequence

⇒Summary: seq-len = 23064 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5287-5515 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQL010000021.1 Clostridioides difficile strain CDI-20 20170383_21_length_64965, whole genome shotgun sequence

⇒Summary: seq-len = 64965 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5371-5533 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQL010000003.1 Clostridioides difficile strain CDI-20 20170383_3_length_149926, whole genome shotgun sequence

⇒Summary: seq-len = 149926 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64596-65277 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQL010000002.1 Clostridioides difficile strain CDI-20 20170383_2_length_213520, whole genome shotgun sequence

⇒Summary: seq-len = 213520 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQL010000086.1 Clostridioides difficile strain CDI-20 20170383_86_length_6008, whole genome shotgun sequence

⇒Summary: seq-len = 6008 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1864-1959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQL010000062.1 Clostridioides difficile strain CDI-20 20170383_62_length_18922, whole genome shotgun sequence

⇒Summary: seq-len = 18922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18151-18770 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQL010000006.1 Clostridioides difficile strain CDI-20 20170383_6_length_125503, whole genome shotgun sequence

⇒Summary: seq-len = 125503 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5653-6076 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)