CRISPRone

CRISPRone report for GCA_015352125.1_ASM1535212v1

♦ Seq 1: JADKQR010000155.1 Clostridioides difficile strain CDI-14 20170094_155_length_5771, whole genome shotgun sequence

⇒Summary: seq-len = 5771 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQR010000062.1 Clostridioides difficile strain CDI-14 20170094_62_length_22617, whole genome shotgun sequence

⇒Summary: seq-len = 22617 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15425-15519 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQR010000030.1 Clostridioides difficile strain CDI-14 20170094_30_length_34889, whole genome shotgun sequence

⇒Summary: seq-len = 34889 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQR010000180.1 Clostridioides difficile strain CDI-14 20170094_180_length_3261, whole genome shotgun sequence

⇒Summary: seq-len = 3261 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1960-2121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQR010000163.1 Clostridioides difficile strain CDI-14 20170094_163_length_4837, whole genome shotgun sequence

⇒Summary: seq-len = 4837 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1915-2474 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQR010000174.1 Clostridioides difficile strain CDI-14 20170094_174_length_3904, whole genome shotgun sequence

⇒Summary: seq-len = 3904 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 304-1060 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQR010000186.1 Clostridioides difficile strain CDI-14 20170094_186_length_3039, whole genome shotgun sequence

⇒Summary: seq-len = 3039 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2062-3011 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQR010000209.1 Clostridioides difficile strain CDI-14 20170094_209_length_1794, whole genome shotgun sequence

⇒Summary: seq-len = 1794 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-1067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQR010000076.1 Clostridioides difficile strain CDI-14 20170094_76_length_18905, whole genome shotgun sequence

⇒Summary: seq-len = 18905 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6848-7272 bp]: array | spacers
           [Locus range 8876-9100 bp]: array | spacers
           [Locus range 10893-11779 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQR010000018.1 Clostridioides difficile strain CDI-14 20170094_18_length_48729, whole genome shotgun sequence

⇒Summary: seq-len = 48729 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44344-44702 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQR010000087.1 Clostridioides difficile strain CDI-14 20170094_87_length_16990, whole genome shotgun sequence

⇒Summary: seq-len = 16990 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JADKQR010000093.1 Clostridioides difficile strain CDI-14 20170094_93_length_16150, whole genome shotgun sequence

⇒Summary: seq-len = 16150 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11919-12603 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)