CRISPRone

CRISPRone report for GCA_015352155.1_ASM1535215v1

♦ Seq 1: JADKRE010000141.1 Clostridioides difficile strain CDI-01 20161052_141_length_10892, whole genome shotgun sequence

⇒Summary: seq-len = 10892 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 10083-10910 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKRE010000027.1 Clostridioides difficile strain CDI-01 20161052_27_length_33635, whole genome shotgun sequence

⇒Summary: seq-len = 33635 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 23258-23880 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKRE010000203.1 Clostridioides difficile strain CDI-01 20161052_203_length_5262, whole genome shotgun sequence

⇒Summary: seq-len = 5262 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4557-5244 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKRE010000175.1 Clostridioides difficile strain CDI-01 20161052_175_length_7227, whole genome shotgun sequence

⇒Summary: seq-len = 7227 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 579-1266 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKRE010000005.1 Clostridioides difficile strain CDI-01 20161052_5_length_60247, whole genome shotgun sequence

⇒Summary: seq-len = 60247 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15-506 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKRE010000058.1 Clostridioides difficile strain CDI-01 20161052_58_length_22810, whole genome shotgun sequence

⇒Summary: seq-len = 22810 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKRE010000183.1 Clostridioides difficile strain CDI-01 20161052_183_length_6655, whole genome shotgun sequence

⇒Summary: seq-len = 6655 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 844-1798 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKRE010000040.1 Clostridioides difficile strain CDI-01 20161052_40_length_28298, whole genome shotgun sequence

⇒Summary: seq-len = 28298 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23590-23884 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKRE010000252.1 Clostridioides difficile strain CDI-01 20161052_252_length_1948, whole genome shotgun sequence

⇒Summary: seq-len = 1948 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-1147 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKRE010000117.1 Clostridioides difficile strain CDI-01 20161052_117_length_13762, whole genome shotgun sequence

⇒Summary: seq-len = 13762 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10563-10658 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKRE010000200.1 Clostridioides difficile strain CDI-01 20161052_200_length_5303, whole genome shotgun sequence

⇒Summary: seq-len = 5303 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2497-2786 bp]: array | spacers
           [Locus range 4651-5007 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JADKRE010000186.1 Clostridioides difficile strain CDI-01 20161052_186_length_6478, whole genome shotgun sequence

⇒Summary: seq-len = 6478 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3958-4584 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)