CRISPRone

CRISPRone report for GCA_015352165.1_ASM1535216v1

♦ Seq 1: JADKQF010000034.1 Clostridioides difficile strain CDI-26 20170714_34_length_31903, whole genome shotgun sequence

⇒Summary: seq-len = 31903 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQF010000004.1 Clostridioides difficile strain CDI-26 20170714_4_length_184903, whole genome shotgun sequence

⇒Summary: seq-len = 184903 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5983-6669 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQF010000026.1 Clostridioides difficile strain CDI-26 20170714_26_length_72941, whole genome shotgun sequence

⇒Summary: seq-len = 72941 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQF010000012.1 Clostridioides difficile strain CDI-26 20170714_12_length_122158, whole genome shotgun sequence

⇒Summary: seq-len = 122158 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQF010000025.1 Clostridioides difficile strain CDI-26 20170714_25_length_73116, whole genome shotgun sequence

⇒Summary: seq-len = 73116 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47069-47426 bp]: array | spacers
           [Locus range 49290-49580 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQF010000030.1 Clostridioides difficile strain CDI-26 20170714_30_length_48459, whole genome shotgun sequence

⇒Summary: seq-len = 48459 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2978-3272 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQF010000003.1 Clostridioides difficile strain CDI-26 20170714_3_length_255046, whole genome shotgun sequence

⇒Summary: seq-len = 255046 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 207495-208121 bp]: array | spacers
           [Locus range 249741-249836 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQF010000009.1 Clostridioides difficile strain CDI-26 20170714_9_length_141793, whole genome shotgun sequence

⇒Summary: seq-len = 141793 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113658-115275 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQF010000001.1 Clostridioides difficile strain CDI-26 20170714_1_length_313972, whole genome shotgun sequence

⇒Summary: seq-len = 313972 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 255226-255849 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQF010000002.1 Clostridioides difficile strain CDI-26 20170714_2_length_266528, whole genome shotgun sequence

⇒Summary: seq-len = 266528 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 153202-154025 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)