CRISPRone

CRISPRone report for GCA_015352175.1_ASM1535217v1

♦ Seq 1: JADKQT010000043.1 Clostridioides difficile strain CDI-12 20170072_43_length_32537, whole genome shotgun sequence

⇒Summary: seq-len = 32537 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3320-3479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQT010000071.1 Clostridioides difficile strain CDI-12 20170072_71_length_3835, whole genome shotgun sequence

⇒Summary: seq-len = 3835 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15-972 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQT010000010.1 Clostridioides difficile strain CDI-12 20170072_10_length_106460, whole genome shotgun sequence

⇒Summary: seq-len = 106460 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4092-4649 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQT010000001.1 Clostridioides difficile strain CDI-12 20170072_1_length_247085, whole genome shotgun sequence

⇒Summary: seq-len = 247085 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 229135-230806 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQT010000038.1 Clostridioides difficile strain CDI-12 20170072_38_length_39194, whole genome shotgun sequence

⇒Summary: seq-len = 39194 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 54-940 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQT010000003.1 Clostridioides difficile strain CDI-12 20170072_3_length_183239, whole genome shotgun sequence

⇒Summary: seq-len = 183239 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 178199-178494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQT010000025.1 Clostridioides difficile strain CDI-12 20170072_25_length_64060, whole genome shotgun sequence

⇒Summary: seq-len = 64060 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2595-2953 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQT010000054.1 Clostridioides difficile strain CDI-12 20170072_54_length_17773, whole genome shotgun sequence

⇒Summary: seq-len = 17773 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13917-14668 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQT010000006.1 Clostridioides difficile strain CDI-12 20170072_6_length_137612, whole genome shotgun sequence

⇒Summary: seq-len = 137612 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQT010000039.1 Clostridioides difficile strain CDI-12 20170072_39_length_37857, whole genome shotgun sequence

⇒Summary: seq-len = 37857 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2447-3853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQT010000094.1 Clostridioides difficile strain CDI-12 20170072_94_length_613, whole genome shotgun sequence

⇒Summary: seq-len = 613 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 190-614 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)