CRISPRone

CRISPRone report for GCA_015352195.1_ASM1535219v1

♦ Seq 1: JADKQS010000030.1 Clostridioides difficile strain CDI-13 20170075_30_length_47785, whole genome shotgun sequence

⇒Summary: seq-len = 47785 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44707-45791 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQS010000029.1 Clostridioides difficile strain CDI-13 20170075_29_length_51399, whole genome shotgun sequence

⇒Summary: seq-len = 51399 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47237-47331 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQS010000004.1 Clostridioides difficile strain CDI-13 20170075_4_length_135252, whole genome shotgun sequence

⇒Summary: seq-len = 135252 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 129213-129636 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQS010000007.1 Clostridioides difficile strain CDI-13 20170075_7_length_122828, whole genome shotgun sequence

⇒Summary: seq-len = 122828 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 121629-122047 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQS010000102.1 Clostridioides difficile strain CDI-13 20170075_102_length_3869, whole genome shotgun sequence

⇒Summary: seq-len = 3869 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2872-3496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQS010000002.1 Clostridioides difficile strain CDI-13 20170075_2_length_156635, whole genome shotgun sequence

⇒Summary: seq-len = 156635 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 71453-72140 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQS010000072.1 Clostridioides difficile strain CDI-13 20170075_72_length_11632, whole genome shotgun sequence

⇒Summary: seq-len = 11632 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3720-4078 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQS010000021.1 Clostridioides difficile strain CDI-13 20170075_21_length_70441, whole genome shotgun sequence

⇒Summary: seq-len = 70441 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3346-4101 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQS010000024.1 Clostridioides difficile strain CDI-13 20170075_24_length_66159, whole genome shotgun sequence

⇒Summary: seq-len = 66159 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQS010000079.1 Clostridioides difficile strain CDI-13 20170075_79_length_9733, whole genome shotgun sequence

⇒Summary: seq-len = 9733 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4075-4235 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQS010000055.1 Clostridioides difficile strain CDI-13 20170075_55_length_20448, whole genome shotgun sequence

⇒Summary: seq-len = 20448 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18810-20215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)