CRISPRone

CRISPRone report for GCA_015352235.1_ASM1535223v1

♦ Seq 1: JADKQV010000001.1 Clostridioides difficile strain CDI-10 20161328_1_length_763212, whole genome shotgun sequence

⇒Summary: seq-len = 763212 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112801-113625 bp]: array | spacers
           [Locus range 421629-421723 bp]: array | spacers
           [Locus range 463344-463969 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQV010000003.1 Clostridioides difficile strain CDI-10 20161328_3_length_289785, whole genome shotgun sequence

⇒Summary: seq-len = 289785 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 78975-79595 bp]: array | spacers
           [Locus range 287984-288941 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQV010000010.1 Clostridioides difficile strain CDI-10 20161328_10_length_141299, whole genome shotgun sequence

⇒Summary: seq-len = 141299 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113658-115275 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQV010000004.1 Clostridioides difficile strain CDI-10 20161328_4_length_237755, whole genome shotgun sequence

⇒Summary: seq-len = 237755 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQV010000002.1 Clostridioides difficile strain CDI-10 20161328_2_length_425240, whole genome shotgun sequence

⇒Summary: seq-len = 425240 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 69358-69980 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQV010000008.1 Clostridioides difficile strain CDI-10 20161328_8_length_149959, whole genome shotgun sequence

⇒Summary: seq-len = 149959 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23870-24159 bp]: array | spacers
           [Locus range 26024-26380 bp]: array | spacers
           [Locus range 118764-119057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)