CRISPRone

CRISPRone report for GCA_015352275.1_ASM1535227v1

♦ Seq 1: JADKQY010000076.1 Clostridioides difficile strain CDI-07 20161267_76_length_5227, whole genome shotgun sequence

⇒Summary: seq-len = 5227 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 459-1017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQY010000009.1 Clostridioides difficile strain CDI-07 20161267_9_length_120848, whole genome shotgun sequence

⇒Summary: seq-len = 120848 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33607-34756 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQY010000002.1 Clostridioides difficile strain CDI-07 20161267_2_length_211401, whole genome shotgun sequence

⇒Summary: seq-len = 211401 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 167251-167344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQY010000049.1 Clostridioides difficile strain CDI-07 20161267_49_length_19819, whole genome shotgun sequence

⇒Summary: seq-len = 19819 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQY010000048.1 Clostridioides difficile strain CDI-07 20161267_48_length_19952, whole genome shotgun sequence

⇒Summary: seq-len = 19952 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7828-8252 bp]: array | spacers
           [Locus range 9856-10080 bp]: array | spacers
           [Locus range 11873-12826 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQY010000020.1 Clostridioides difficile strain CDI-07 20161267_20_length_69116, whole genome shotgun sequence

⇒Summary: seq-len = 69116 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4215-5365 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQY010000013.1 Clostridioides difficile strain CDI-07 20161267_13_length_109523, whole genome shotgun sequence

⇒Summary: seq-len = 109523 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16029-16189 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQY010000045.1 Clostridioides difficile strain CDI-07 20161267_45_length_24835, whole genome shotgun sequence

⇒Summary: seq-len = 24835 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19961-20717 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQY010000010.1 Clostridioides difficile strain CDI-07 20161267_10_length_120448, whole genome shotgun sequence

⇒Summary: seq-len = 120448 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64548-66017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQY010000011.1 Clostridioides difficile strain CDI-07 20161267_11_length_119308, whole genome shotgun sequence

⇒Summary: seq-len = 119308 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44274-44700 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQY010000004.1 Clostridioides difficile strain CDI-07 20161267_4_length_195316, whole genome shotgun sequence

⇒Summary: seq-len = 195316 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 107370-107987 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)