CRISPRone

CRISPRone report for GCA_015352315.1_ASM1535231v1

♦ Seq 1: JADKQZ010000002.1 Clostridioides difficile strain CDI-06 20161262_2_length_155331, whole genome shotgun sequence

⇒Summary: seq-len = 155331 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKQZ010000004.1 Clostridioides difficile strain CDI-06 20161262_4_length_125353, whole genome shotgun sequence

⇒Summary: seq-len = 125353 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 117541-118167 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKQZ010000099.1 Clostridioides difficile strain CDI-06 20161262_99_length_11053, whole genome shotgun sequence

⇒Summary: seq-len = 11053 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1799 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKQZ010000019.1 Clostridioides difficile strain CDI-06 20161262_19_length_50519, whole genome shotgun sequence

⇒Summary: seq-len = 50519 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKQZ010000088.1 Clostridioides difficile strain CDI-06 20161262_88_length_12707, whole genome shotgun sequence

⇒Summary: seq-len = 12707 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8582-8871 bp]: array | spacers
           [Locus range 10736-11092 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKQZ010000009.1 Clostridioides difficile strain CDI-06 20161262_9_length_78750, whole genome shotgun sequence

⇒Summary: seq-len = 78750 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61396-62481 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKQZ010000007.1 Clostridioides difficile strain CDI-06 20161262_7_length_80440, whole genome shotgun sequence

⇒Summary: seq-len = 80440 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32280-32375 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKQZ010000017.1 Clostridioides difficile strain CDI-06 20161262_17_length_54940, whole genome shotgun sequence

⇒Summary: seq-len = 54940 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 11070-11757 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKQZ010000025.1 Clostridioides difficile strain CDI-06 20161262_25_length_42482, whole genome shotgun sequence

⇒Summary: seq-len = 42482 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26379-27930 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKQZ010000035.1 Clostridioides difficile strain CDI-06 20161262_35_length_32830, whole genome shotgun sequence

⇒Summary: seq-len = 32830 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1710-2003 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKQZ010000175.1 Clostridioides difficile strain CDI-06 20161262_175_length_3158, whole genome shotgun sequence

⇒Summary: seq-len = 3158 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1908-2531 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JADKQZ010000044.1 Clostridioides difficile strain CDI-06 20161262_44_length_30201, whole genome shotgun sequence

⇒Summary: seq-len = 30201 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)