CRISPRone

CRISPRone report for GCA_015352355.1_ASM1535235v1

♦ Seq 1: JADKRA010000004.1 Clostridioides difficile strain CDI-05 20161198_4_length_85384, whole genome shotgun sequence

⇒Summary: seq-len = 85384 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30827-30923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADKRA010000024.1 Clostridioides difficile strain CDI-05 20161198_24_length_44525, whole genome shotgun sequence

⇒Summary: seq-len = 44525 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23673-23962 bp]: array | spacers
           [Locus range 25827-26183 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADKRA010000109.1 Clostridioides difficile strain CDI-05 20161198_109_length_10916, whole genome shotgun sequence

⇒Summary: seq-len = 10916 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 845-1803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JADKRA010000139.1 Clostridioides difficile strain CDI-05 20161198_139_length_7571, whole genome shotgun sequence

⇒Summary: seq-len = 7571 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5951-6637 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JADKRA010000050.1 Clostridioides difficile strain CDI-05 20161198_50_length_27001, whole genome shotgun sequence

⇒Summary: seq-len = 27001 bp; # of CRISPR array = 0; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JADKRA010000022.1 Clostridioides difficile strain CDI-05 20161198_22_length_46827, whole genome shotgun sequence

⇒Summary: seq-len = 46827 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7754-7848 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JADKRA010000001.1 Clostridioides difficile strain CDI-05 20161198_1_length_157528, whole genome shotgun sequence

⇒Summary: seq-len = 157528 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 101198-101821 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JADKRA010000101.1 Clostridioides difficile strain CDI-05 20161198_101_length_11685, whole genome shotgun sequence

⇒Summary: seq-len = 11685 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JADKRA010000018.1 Clostridioides difficile strain CDI-05 20161198_18_length_50556, whole genome shotgun sequence

⇒Summary: seq-len = 50556 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 31479-33096 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JADKRA010000103.1 Clostridioides difficile strain CDI-05 20161198_103_length_11679, whole genome shotgun sequence

⇒Summary: seq-len = 11679 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8415-9041 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JADKRA010000006.1 Clostridioides difficile strain CDI-05 20161198_6_length_79500, whole genome shotgun sequence

⇒Summary: seq-len = 79500 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 27655-28478 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)