CRISPRone

CRISPRone report for GCA_015547555.1_ASM1554755v1

♦ Seq 1: JADMVI010000005.1 Bacteroides fragilis strain 1001271B_151109_A3 NODE_5_length_199400_cov_24.995, whole genome shotgun sequence

⇒Summary: seq-len = 199400 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 122390-126000 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 122390-123055 bp Gene: unk Type: unknown Location: 123058-123831 bp Gene: unk Type: unknown Location: 123839-125104 bp Gene: pfam13280:WYL Type: other Location: 125101-126000 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADMVI010000019.1 Bacteroides fragilis strain 1001271B_151109_A3 NODE_19_length_113878_cov_20.8287, whole genome shotgun sequence

⇒Summary: seq-len = 113878 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 111353-111665 bp Zoom in on locus 1 x5 CRISPR array Location: 111353-111665 bp Num of repeats: 5 Spacers: s1-s4 CRISPR array Location: 111353-111665 bp Num of repeats: 5 Spacers: s1-s4 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 111353-111665 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADMVI010000018.1 Bacteroides fragilis strain 1001271B_151109_A3 NODE_18_length_125108_cov_21.9107, whole genome shotgun sequence

⇒Summary: seq-len = 125108 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 29903-40097 bp Zoom in on locus 1 x37 Gene: cd09652:cas6 Type: other Location: 29903-30568 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 30581-31144 bp Gene: cd09641:cas3HD Type: Type-I Location: 31134-32567 bp Gene: COG1203:cas3 Type: Type-I Location: 32608-33294 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 33298-34623 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 34636-35694 bp Gene: pfam01930:cas4 Type: Type-I Location: 35759-36271 bp Gene: cd09722:cas1 Type: universal Location: 36268-37281 bp Gene: cd09725:cas2 Type: universal Location: 37284-37547 bp CRISPR array Location: 37762-40097 bp Num of repeats: 37 Spacers: s1-s36 CRISPR array Location: 37762-40097 bp Num of repeats: 37 Spacers: s1-s36 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37762-40097 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)