CRISPRone

CRISPRone report for GCA_015548495.1_ASM1554849v1

♦ Seq 1: JADMXD010000004.1 Bacteroides fragilis strain BSD2780061689_150309_H4 NODE_4_length_415184_cov_25.1266, whole genome shotgun sequence

⇒Summary: seq-len = 415184 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 138574-154206 bp Zoom in on locus 1 x29 CRISPR array Location: 138574-140578 bp Num of repeats: 29 Spacers: s1-s28 CRISPR array Location: 138574-140578 bp Num of repeats: 29 Spacers: s1-s28 Gene: cd09725:cas2 Type: universal Location: 141026-141316 bp Gene: cd09634:cas1 Type: universal Location: 141310-143580 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 143600-144544 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 144547-144957 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 144970-145809 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 145829-146968 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 146961-148763 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 148768-150177 bp Gene: unk Type: unknown Location: 150191-150670 bp Gene: cash17:cash17 Type: Type- Location: 150667-152094 bp Gene: unk Type: unknown Location: 152139-152918 bp Gene: unk Type: unknown Location: 152894-153520 bp Gene: cls000004:cas6 Type: other Location: 153538-154206 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 138574-140578 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADMXD010000003.1 Bacteroides fragilis strain BSD2780061689_150309_H4 NODE_3_length_454861_cov_30.5616, whole genome shotgun sequence

⇒Summary: seq-len = 454861 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 82714-86327 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 82714-83382 bp Gene: unk Type: unknown Location: 83385-84158 bp Gene: unk Type: unknown Location: 84166-85431 bp Gene: pfam13280:WYL Type: other Location: 85428-86327 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)