CRISPRone

CRISPRone report for GCA_015551365.1_ASM1555136v1

♦ Seq 1: JADNCR010000010.1 Bacteroides fragilis strain 1001254J_160919_G3 NODE_10_length_186354_cov_28.0485, whole genome shotgun sequence

⇒Summary: seq-len = 186354 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 144088-158175 bp Zoom in on locus 1 x7 CRISPR array Location: 144088-144547 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 144088-144547 bp Num of repeats: 7 Spacers: s1-s6 Gene: cd09725:cas2 Type: universal Location: 144995-145285 bp Gene: cd09634:cas1 Type: universal Location: 145279-147549 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 147569-148513 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 148516-148926 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 148939-149778 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 149798-150937 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 150930-152732 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 152737-154146 bp Gene: unk Type: unknown Location: 154160-154639 bp Gene: cash17:cash17 Type: Type- Location: 154636-156063 bp Gene: unk Type: unknown Location: 156108-156887 bp Gene: unk Type: unknown Location: 156863-157489 bp Gene: cls000004:cas6 Type: other Location: 157507-158175 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 144088-144547 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADNCR010000002.1 Bacteroides fragilis strain 1001254J_160919_G3 NODE_2_length_384734_cov_36.8282, whole genome shotgun sequence

⇒Summary: seq-len = 384734 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 115121-118734 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 115121-115789 bp Gene: unk Type: unknown Location: 115792-116565 bp Gene: unk Type: unknown Location: 116573-117838 bp Gene: pfam13280:WYL Type: other Location: 117835-118734 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADNCR010000009.1 Bacteroides fragilis strain 1001254J_160919_G3 NODE_9_length_207141_cov_41.0965, whole genome shotgun sequence

⇒Summary: seq-len = 207141 bp; # of CRISPR array = 0; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1084-7697 bp Zoom in on locus 1 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 1084-1416 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 1420-2352 bp Gene: unk Type: unknown Location: 2472-2780 bp Gene: unk Type: unknown Location: 2847-3371 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 3387-7697 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)