CRISPRone

CRISPRone report for GCA_015553295.1_ASM1555329v1

♦ Seq 1: JADNGK010000009.1 Bacteroides fragilis strain 1001095H_141210_E11 NODE_9_length_173114_cov_30.1495, whole genome shotgun sequence

⇒Summary: seq-len = 173114 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 77439-81052 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 77439-78107 bp Gene: unk Type: unknown Location: 78110-78883 bp Gene: unk Type: unknown Location: 78891-80156 bp Gene: pfam13280:WYL Type: other Location: 80153-81052 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADNGK010000029.1 Bacteroides fragilis strain 1001095H_141210_E11 NODE_29_length_52084_cov_33.3744, whole genome shotgun sequence

⇒Summary: seq-len = 52084 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 464-9071 bp Zoom in on locus 1 x25 CRISPR array Location: 464-2350 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 464-2350 bp Num of repeats: 25 Spacers: s1-s24 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2459-2791 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 2795-3727 bp Gene: unk Type: unknown Location: 3847-4155 bp Gene: unk Type: unknown Location: 4353-4745 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 4761-9071 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 464-2350 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JADNGK010000030.1 Bacteroides fragilis strain 1001095H_141210_E11 NODE_30_length_51157_cov_24.5765, whole genome shotgun sequence

⇒Summary: seq-len = 51157 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 28965-31412 bp Zoom in on locus 1 x11 Gene: cd09652:cas6 Type: other Location: 28965-29636 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 29648-30028 bp Gene: cd09722:cas1 Type: universal Location: 30021-30260 bp Gene: cd09725:cas2 Type: universal Location: 30263-30526 bp CRISPR array Location: 30739-31412 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 30739-31412 bp Num of repeats: 11 Spacers: s1-s10 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 30739-31412 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)