CRISPRone

CRISPRone report for GCA_015553755.1_ASM1555375v1

♦ Seq 1: JADNHE010000014.1 Bacteroides fragilis strain D54t1_190329_B1 NODE_14_length_128515_cov_22.0643, whole genome shotgun sequence

⇒Summary: seq-len = 128515 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 101828-110938 bp Zoom in on locus 1 x20 CRISPR array Location: 101828-103077 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 101828-103077 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09725:cas2 Type: universal Location: 103290-103553 bp Gene: cd09722:cas1 Type: universal Location: 103556-104569 bp Gene: pfam01930:cas4 Type: Type-I Location: 104566-105078 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 105143-106201 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 106214-107539 bp Gene: COG1203:cas3 Type: Type-I Location: 107543-109702 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 109692-110255 bp Gene: cd09652:cas6 Type: other Location: 110267-110938 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 101828-103077 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADNHE010000003.1 Bacteroides fragilis strain D54t1_190329_B1 NODE_3_length_246731_cov_25.4118, whole genome shotgun sequence

⇒Summary: seq-len = 246731 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8114-10245 bp 2 Locus 2: 131924-135537 bp Zoom in on locus 1 Zoom in on locus 2 Gene: mkCas0090:PD-DExK Type: other Location: 8114-8905 bp Gene: unk Type: unknown Location: 8954-9811 bp Gene: cd09680:cas10 Type: Type-III Location: 10030-10245 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 131924-132592 bp Gene: unk Type: unknown Location: 132595-133368 bp Gene: unk Type: unknown Location: 133376-134641 bp Gene: pfam13280:WYL Type: other Location: 134638-135537 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)