CRISPRone

CRISPRone report for GCA_015669295.1_ASM1566929v1

♦ Seq 1: JADOZX010000001.1 Bacteroides fragilis strain D33t1_170424_C9 NODE_1_length_661670_cov_28.0096, whole genome shotgun sequence

⇒Summary: seq-len = 661670 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 518033-533447 bp Zoom in on locus 1 x25 Gene: cls000004:cas6 Type: other Location: 518033-518764 bp Gene: unk Type: unknown Location: 518782-519408 bp Gene: unk Type: unknown Location: 519384-520163 bp Gene: cash17:cash17 Type: Type- Location: 520208-521635 bp Gene: unk Type: unknown Location: 521632-522111 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 522125-523534 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 523539-525341 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 525334-526473 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 526493-527332 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 527345-527755 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 527752-528702 bp Gene: cd09634:cas1 Type: universal Location: 528722-530992 bp Gene: cd09725:cas2 Type: universal Location: 530986-531276 bp CRISPR array Location: 531724-533447 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 531724-533447 bp Num of repeats: 25 Spacers: s1-s24 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 531724-533447 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADOZX010000002.1 Bacteroides fragilis strain D33t1_170424_C9 NODE_2_length_587194_cov_35.6735, whole genome shotgun sequence

⇒Summary: seq-len = 587194 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 123568-127181 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 123568-124236 bp Gene: unk Type: unknown Location: 124239-125012 bp Gene: unk Type: unknown Location: 125020-126285 bp Gene: pfam13280:WYL Type: other Location: 126282-127181 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)