CRISPRone

CRISPRone report for GCA_015669435.1_ASM1566943v1

♦ Seq 1: JADPAE010000002.1 Bacteroides fragilis strain 1001136B_160425_F11 NODE_2_length_547267_cov_35.9571, whole genome shotgun sequence

⇒Summary: seq-len = 547267 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 409242-412855 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 409242-410141 bp Gene: unk Type: unknown Location: 410138-411403 bp Gene: unk Type: unknown Location: 411411-412184 bp Gene: cd09692:cas5 Type: Subtype-I-B Location: 412187-412855 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JADPAE010000025.1 Bacteroides fragilis strain 1001136B_160425_F11 NODE_25_length_44990_cov_39.4086, whole genome shotgun sequence

⇒Summary: seq-len = 44990 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 748-9469 bp Zoom in on locus 1 x25 CRISPR array Location: 748-2634 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 748-2634 bp Num of repeats: 25 Spacers: s1-s24 Gene: pfam09827:cas2 Type: Subtype-II-C Location: 2743-3075 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 3079-4011 bp Gene: unk Type: unknown Location: 4131-4439 bp Gene: unk Type: unknown Location: 4506-5030 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 5046-9356 bp antiRepeat Location: 9424-9469 bp Strand: - Match length: 26 bp Mismatch: 21 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 748-2634 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)