CRISPRone

CRISPRone report for GCA_015697605.1_ASM1569760v1

♦ Seq 1: CP060241.1 Pseudomonas aeruginosa strain C-I-1 chromosome, complete genome

⇒Summary: seq-len = 6325392 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2099250-2109518 bp Zoom in on locus 1 x6 x2 x9 CRISPR array Location: 2099250-2099584 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 2099250-2099584 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 2099678-2099768 bp Num of repeats: 2 Spacers: s6-s6 CRISPR array Location: 2099678-2099768 bp Num of repeats: 2 Spacers: s6-s6 Gene: cd09641:cas3HD Type: Type-I Location: 2100542-2103223 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2103226-2104794 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 2104791-2105321 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 2105331-2106473 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2106475-2107137 bp Gene: pfam08798:cas6e Type: other Location: 2107112-2107723 bp Gene: cd09719:cas1 Type: universal Location: 2107750-2108640 bp Gene: pfam09707:cas2 Type: universal Location: 2108637-2108936 bp CRISPR array Location: 2109001-2109518 bp Num of repeats: 9 Spacers: s7-s14 CRISPR array Location: 2109001-2109518 bp Num of repeats: 9 Spacers: s7-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2099250-2099584 bp]: array | spacers
           [Locus range 2099678-2099768 bp]: array | spacers
           [Locus range 2109001-2109518 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)