CRISPRone

CRISPRone report for GCA_015732085.1_ASM1573208v1

♦ Seq 1: JACKWR010000002.1 Pseudomonas aeruginosa strain F-I-1 ctg.s1.000001F.arrow, whole genome shotgun sequence

⇒Summary: seq-len = 650896 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 164910-175815 bp Zoom in on locus 1 x17 x17 CRISPR array Location: 164910-165899 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 164910-165899 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 166083-166646 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 166650-167678 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 167689-168672 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 168659-169960 bp Gene: COG1203:cas3 Type: Type-I Location: 170371-173601 bp Gene: cd09718:cas1 Type: universal Location: 173598-174569 bp CRISPR array Location: 174827-175815 bp Num of repeats: 17 Spacers: s17-s32 CRISPR array Location: 174827-175815 bp Num of repeats: 17 Spacers: s17-s32 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 164910-165899 bp]: array | spacers
           [Locus range 174827-175815 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JACKWR010000001.1 Pseudomonas aeruginosa strain F-I-1 ctg.s1.000000F.arrow, whole genome shotgun sequence

⇒Summary: seq-len = 6067000 bp; # of CRISPR array = 1; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1263275-1263362 bp 2 Locus 2: 1697866-1708451 bp Zoom in on locus 1 x2 Zoom in on locus 2 CRISPR array Location: 1263275-1263362 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 1263275-1263362 bp Num of repeats: 2 Spacers: s1-s1 Gene: cls000170:cas4 Type: Type-I Location: 1697866-1699410 bp Gene: unk Type: unknown Location: 1700494-1700673 bp Gene: pfam00078:RT Type: other Location: 1701405-1702673 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 1707582-1708451 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1263275-1263362 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)