CRISPRone

CRISPRone report for GCA_016054875.1_ASM1605487v1

♦ Seq 1: JAECSG010000050.1 Pseudomonas aeruginosa strain CCBH28612 50, whole genome shotgun sequence

⇒Summary: seq-len = 46297 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1001-12220 bp Zoom in on locus 1 x26 x19 CRISPR array Location: 1001-2529 bp Num of repeats: 26 Spacers: s1-s25 CRISPR array Location: 1001-2529 bp Num of repeats: 26 Spacers: s1-s25 Gene: cd09718:cas1 Type: universal Location: 2790-3764 bp Gene: COG1203:cas3 Type: Type-I Location: 3761-6991 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 7049-8353 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 8340-9323 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 9334-10362 bp Gene: cd09739:cas6f Type: other Location: 10366-10929 bp CRISPR array Location: 11113-12220 bp Num of repeats: 19 Spacers: s26-s43 CRISPR array Location: 11113-12220 bp Num of repeats: 19 Spacers: s26-s43 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1001-2529 bp]: array | spacers
           [Locus range 11113-12220 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)