CRISPRone

CRISPRone report for GCA_016055845.1_ASM1605584v1

♦ Seq 1: JAECTT010000003.1 Pseudomonas aeruginosa strain CCBH27337 NODE_3_length_500089_cov_35.968334, whole genome shotgun sequence

⇒Summary: seq-len = 500089 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 151221-161834 bp Zoom in on locus 1 x40 Gene: cd09641:cas3HD Type: Type-I Location: 151221-153455 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 153506-154180 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 154177-155970 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 155967-156836 bp Gene: pfam01930:cas4 Type: Type-I Location: 156855-157487 bp Gene: cd09721:cas1 Type: universal Location: 157491-158531 bp Gene: cd09725:cas2 Type: universal Location: 158541-158831 bp CRISPR array Location: 159013-161633 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 159013-161633 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 159123-159326 bp Gene: cd09735:cas8f Type: Subtype-I-F Location: 161460-161834 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 159013-161633 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)