CRISPRone

CRISPRone report for GCA_016093575.1_ASM1609357v1

♦ Seq 1: VBZE01000001.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_1, whole genome shotgun sequence

⇒Summary: seq-len = 260395 bp; # of CRISPR array = 0; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZE01000070.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_70, whole genome shotgun sequence

⇒Summary: seq-len = 25997 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2816-2975 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZE01000007.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 317565 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 72438-72995 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZE01000049.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_49, whole genome shotgun sequence

⇒Summary: seq-len = 10432 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-162 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZE01000060.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_60, whole genome shotgun sequence

⇒Summary: seq-len = 46534 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZE01000085.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_86, whole genome shotgun sequence

⇒Summary: seq-len = 10277 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9345-10293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZE01000004.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_4, whole genome shotgun sequence

⇒Summary: seq-len = 213169 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124123-125138 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZE01000030.1 Clostridioides difficile strain GV1125 2409_S84_L001_R1_001__paired__contig_30, whole genome shotgun sequence

⇒Summary: seq-len = 16566 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-210 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)