CRISPRone

CRISPRone report for GCA_016093635.1_ASM1609363v1

♦ Seq 1: VBZF01000019.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 18995 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18650-19009 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZF01000323.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_329, whole genome shotgun sequence

⇒Summary: seq-len = 212 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZF01000073.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_73, whole genome shotgun sequence

⇒Summary: seq-len = 54826 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 48612-50085 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZF01000116.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_117, whole genome shotgun sequence

⇒Summary: seq-len = 7180 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2120-2478 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZF01000294.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_299, whole genome shotgun sequence

⇒Summary: seq-len = 838 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 746-841 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZF01000276.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_279, whole genome shotgun sequence

⇒Summary: seq-len = 202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZF01000161.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_163, whole genome shotgun sequence

⇒Summary: seq-len = 3226 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-357 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZF01000015.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_15, whole genome shotgun sequence

⇒Summary: seq-len = 35076 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17182-17342 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VBZF01000278.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_281, whole genome shotgun sequence

⇒Summary: seq-len = 335 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-347 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VBZF01000086.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_87, whole genome shotgun sequence

⇒Summary: seq-len = 18301 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-358 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VBZF01000097.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_98, whole genome shotgun sequence

⇒Summary: seq-len = 18554 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-621 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VBZF01000141.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_143, whole genome shotgun sequence

⇒Summary: seq-len = 23600 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 15-113 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VBZF01000027.1 Clostridioides difficile strain GV1105 2318_S81_L001_R1_001__paired__contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 68724 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)