CRISPRone

CRISPRone report for GCA_016093675.1_ASM1609367v1

♦ Seq 1: VBZI01000236.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_240, whole genome shotgun sequence

⇒Summary: seq-len = 286 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-287 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZI01000113.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_113, whole genome shotgun sequence

⇒Summary: seq-len = 11437 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-148 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZI01000066.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_66, whole genome shotgun sequence

⇒Summary: seq-len = 98240 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-426 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZI01000060.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_60, whole genome shotgun sequence

⇒Summary: seq-len = 64990 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 57265-57624 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZI01000058.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_58, whole genome shotgun sequence

⇒Summary: seq-len = 96244 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZI01000091.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_91, whole genome shotgun sequence

⇒Summary: seq-len = 22020 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16820-16980 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZI01000120.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_120, whole genome shotgun sequence

⇒Summary: seq-len = 7924 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1910-2205 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZI01000358.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_380, whole genome shotgun sequence

⇒Summary: seq-len = 249 bp; # of CRISPR array = 0; # of cas gene = 1  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VBZI01000102.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_102, whole genome shotgun sequence

⇒Summary: seq-len = 6847 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-228 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VBZI01000072.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_72, whole genome shotgun sequence

⇒Summary: seq-len = 28282 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-229 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VBZI01000029.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_29, whole genome shotgun sequence

⇒Summary: seq-len = 9694 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9345-9505 bp]: array | spacers
           [Locus range 9610-9707 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VBZI01000005.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_5, whole genome shotgun sequence

⇒Summary: seq-len = 160694 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 94834-96570 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VBZI01000012.1 Clostridioides difficile strain GV1002 2143_S77_L001_R1_001__paired__contig_12, whole genome shotgun sequence

⇒Summary: seq-len = 165241 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 123689-124703 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)