CRISPRone

CRISPRone report for GCA_016093715.1_ASM1609371v1

♦ Seq 1: VBZK01000167.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_167, whole genome shotgun sequence

⇒Summary: seq-len = 589 bp; # of CRISPR array = 0; # of cas gene = 1  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZK01000083.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_83, whole genome shotgun sequence

⇒Summary: seq-len = 39850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 39630-39857 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZK01000034.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_34, whole genome shotgun sequence

⇒Summary: seq-len = 71469 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 70724-71471 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZK01000027.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 24468 bp; # of CRISPR array = 0; # of cas gene = 3  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZK01000025.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_25, whole genome shotgun sequence

⇒Summary: seq-len = 32974 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18174-18469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZK01000137.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_137, whole genome shotgun sequence

⇒Summary: seq-len = 9611 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3420-3713 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZK01000165.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_165, whole genome shotgun sequence

⇒Summary: seq-len = 1178 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 902-1195 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZK01000254.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_255, whole genome shotgun sequence

⇒Summary: seq-len = 534 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-548 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VBZK01000164.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_164, whole genome shotgun sequence

⇒Summary: seq-len = 475 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-479 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VBZK01000281.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_282, whole genome shotgun sequence

⇒Summary: seq-len = 210 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-212 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VBZK01000220.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_221, whole genome shotgun sequence

⇒Summary: seq-len = 202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-216 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VBZK01000064.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_64, whole genome shotgun sequence

⇒Summary: seq-len = 25135 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 24454-25142 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VBZK01000033.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_33, whole genome shotgun sequence

⇒Summary: seq-len = 55727 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17076-17501 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: VBZK01000051.1 Clostridioides difficile strain GV996 2122_S75_L001_R1_001__paired__contig_51, whole genome shotgun sequence

⇒Summary: seq-len = 17985 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 762-921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)