CRISPRone

CRISPRone report for GCA_016093735.1_ASM1609373v1

♦ Seq 1: VBZL01000071.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_71, whole genome shotgun sequence

⇒Summary: seq-len = 60431 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VBZL01000021.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_21, whole genome shotgun sequence

⇒Summary: seq-len = 31262 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-225 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VBZL01000027.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_27, whole genome shotgun sequence

⇒Summary: seq-len = 14243 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13365-14255 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VBZL01000007.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_7, whole genome shotgun sequence

⇒Summary: seq-len = 244554 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 243344-244556 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VBZL01000099.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_99, whole genome shotgun sequence

⇒Summary: seq-len = 8050 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7569-8057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VBZL01000123.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_125, whole genome shotgun sequence

⇒Summary: seq-len = 218 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3-230 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VBZL01000017.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_17, whole genome shotgun sequence

⇒Summary: seq-len = 151747 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9117-10132 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VBZL01000054.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_54, whole genome shotgun sequence

⇒Summary: seq-len = 76768 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30580-30740 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VBZL01000111.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_111, whole genome shotgun sequence

⇒Summary: seq-len = 303 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10-304 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: VBZL01000112.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_112, whole genome shotgun sequence

⇒Summary: seq-len = 608 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: VBZL01000101.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_101, whole genome shotgun sequence

⇒Summary: seq-len = 2450 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1910-2465 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: VBZL01000036.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_36, whole genome shotgun sequence

⇒Summary: seq-len = 33274 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-228 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: VBZL01000092.1 Clostridioides difficile strain GV986 2075_S73_L001_R1_001__paired__contig_92, whole genome shotgun sequence

⇒Summary: seq-len = 7449 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7368-7461 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)